Index

A

addEvaluations() (UGParameterEstimator.dataanalysis.result.Result method) addMetric() (UGParameterEstimator.dataanalysis.result.Result method)

addParameter() (UGParameterEstimator.parametermanagement.parameterManager.ParameterManager method) addRunMetadata() (UGParameterEstimator.dataanalysis.result.Result method)

B

BacktrackingLineSearch (class in UGParameterEstimator.linesearches.lineSearches)

BayesOptimizer (class in UGParameterEstimator.optimizers.bayesOptimizer) BinaryReader (class in UGParameterEstimator.evaluationinput.freesurface_evaluation)

C

c (UGParameterEstimator.linesearches.lineSearches.BacktrackingLineSearch attribute) (UGParameterEstimator.linesearches.lineSearches.LinearParallelLineSearch attribute) (UGParameterEstimator.linesearches.lineSearches.LogarithmicParallelLineSearch attribute) cache (UGParameterEstimator.evaluators.evaluator.Evaluator attribute) cached_evaluation_count (UGParameterEstimator.evaluators.evaluator.Evaluator attribute) calculateDelta() (UGParameterEstimator.optimizers.gainedLevMarOptimizer.GainedLevMarOptimizer method) (UGParameterEstimator.optimizers.levMarOptimizer.LevMarOptimizer method)

calculateGainRatio() (UGParameterEstimator.optimizers.gainedLevMarOptimizer.GainedLevMarOptimizer method) central (UGParameterEstimator.optimizers.optimizer.Optimizer.Differencing attribute) checkCache() (UGParameterEstimator.evaluators.evaluator.Evaluator method) close() (UGParameterEstimator.evaluationinput.freesurface_evaluation.BinaryReader method) ClusterEvaluator (class in UGParameterEstimator.evaluators.clusterEvaluator) commitIteration() (UGParameterEstimator.dataanalysis.result.Result method) ConstructEvaluator() (UGParameterEstimator.evaluators.evaluator.Evaluator class method)

D

data (UGParameterEstimator.evaluationinput.freesurface_evaluation.FreeSurfaceEvaluation attribute) dimension (UGParameterEstimator.evaluationinput.freesurface_evaluation.FreeSurfaceEvaluation attribute) DirectParameter (class in UGParameterEstimator.parametermanagement.parameterManager)

doLineSearch() (UGParameterEstimator.linesearches.lineSearches.BacktrackingLineSearch method) (UGParameterEstimator.linesearches.lineSearches.LinearParallelLineSearch method) (UGParameterEstimator.linesearches.lineSearches.LineSearch method) (UGParameterEstimator.linesearches.lineSearches.LogarithmicParallelLineSearch method)

E

EQUILIBRIUM_CONSTANT (UGParameterEstimator.evaluationinput.freesurface_evaluation.FreeSurfaceTimeDependentEvaluation attribute) ErroredEvaluation (class in UGParameterEstimator.evaluationinput.evaluation) eval_id (UGParameterEstimator.evaluationinput.evaluation.Evaluation attribute) evaluate() (UGParameterEstimator.evaluators.clusterEvaluator.ClusterEvaluator method) (UGParameterEstimator.evaluators.evaluator.Evaluator method) (UGParameterEstimator.evaluators.localEvaluator.LocalEvaluator method)

Evaluation (class in UGParameterEstimator.evaluationinput.evaluation) Evaluation.IncompatibleFormatError Evaluator (class in UGParameterEstimator.evaluators.evaluator)

F

fexp() (in module UGParameterEstimator.dataanalysis.result) fman() (in module UGParameterEstimator.dataanalysis.result) forward (UGParameterEstimator.optimizers.optimizer.Optimizer.Differencing attribute) FreeSurfaceEquilibriumEvaluation (class in UGParameterEstimator.evaluationinput.freesurface_evaluation) FreeSurfaceEvaluation (class in UGParameterEstimator.evaluationinput.freesurface_evaluation)

FreeSurfaceEvaluation.NaNHandling (class in UGParameterEstimator.evaluationinput.freesurface_evaluation) FreeSurfaceTimeDependentEvaluation (class in UGParameterEstimator.evaluationinput.freesurface_evaluation) fromCSV() (UGParameterEstimator.evaluationinput.freesurface_evaluation.FreeSurfaceEquilibriumEvaluation class method) fromNumpyArray() (UGParameterEstimator.evaluationinput.freesurface_evaluation.FreeSurfaceEquilibriumEvaluation class method) (UGParameterEstimator.evaluationinput.freesurface_evaluation.FreeSurfaceTimeDependentEvaluation class method) fromTimedependentTimeseries() (UGParameterEstimator.evaluationinput.freesurface_evaluation.FreeSurfaceEquilibriumEvaluation class method)

G

GainedLevMarOptimizer (class in UGParameterEstimator.optimizers.gainedLevMarOptimizer) GaussNewtonOptimizer (class in UGParameterEstimator.optimizers.gaussNewtonOptimizer) getFactorOfEquilibrium() (UGParameterEstimator.evaluationinput.freesurface_evaluation.FreeSurfaceTimeDependentEvaluation method) getInitialArray() (UGParameterEstimator.parametermanagement.parameterManager.ParameterManager method) getJacobiMatrix() (UGParameterEstimator.optimizers.optimizer.Optimizer method) getLatexString() (UGParameterEstimator.dataanalysis.result.Result static method) getNumpyArray() (UGParameterEstimator.evaluationinput.evaluation.ErroredEvaluation method) (UGParameterEstimator.evaluationinput.evaluation.Evaluation method) (UGParameterEstimator.evaluationinput.freesurface_evaluation.FreeSurfaceEvaluation method) getNumpyArrayLike() (UGParameterEstimator.evaluationinput.evaluation.ErroredEvaluation method) (UGParameterEstimator.evaluationinput.evaluation.Evaluation method) (UGParameterEstimator.evaluationinput.freesurface_evaluation.FreeSurfaceEquilibriumEvaluation method) (UGParameterEstimator.evaluationinput.freesurface_evaluation.FreeSurfaceEvaluation method) (UGParameterEstimator.evaluationinput.freesurface_evaluation.FreeSurfaceTimeDependentEvaluation method)

getStatistics() (UGParameterEstimator.evaluators.evaluator.Evaluator method) getTransformedParameter() (UGParameterEstimator.parametermanagement.parameterManager.DirectParameter method) (UGParameterEstimator.parametermanagement.parameterManager.LogParameter method) (UGParameterEstimator.parametermanagement.parameterManager.Parameter method) (UGParameterEstimator.parametermanagement.parameterManager.ScaledParameter method) getTransformedParameters() (UGParameterEstimator.parametermanagement.parameterManager.ParameterManager method) GradientDescentOptimizer (class in UGParameterEstimator.optimizers.gradDescOptimizer)

H

handleNewEvaluations() (UGParameterEstimator.evaluators.evaluator.Evaluator method)

hasSameLocations() (UGParameterEstimator.evaluationinput.freesurface_evaluation.FreeSurfaceEvaluation static method) highest_power (UGParameterEstimator.linesearches.lineSearches.LogarithmicParallelLineSearch attribute)

I

initialValue (UGParameterEstimator.parametermanagement.parameterManager.DirectParameter property) (UGParameterEstimator.parametermanagement.parameterManager.LogParameter property) (UGParameterEstimator.parametermanagement.parameterManager.Parameter property) (UGParameterEstimator.parametermanagement.parameterManager.ScaledParameter property)

isInEquilibrium() (UGParameterEstimator.evaluationinput.freesurface_evaluation.FreeSurfaceTimeDependentEvaluation method) isValidOptimizationSpaceParameter() (UGParameterEstimator.parametermanagement.parameterManager.Parameter method) (UGParameterEstimator.parametermanagement.parameterManager.ParameterManager method) iterationCount (UGParameterEstimator.dataanalysis.result.Result property)

K

KeyValueFileParameterOutputAdapter (class in UGParameterEstimator.parametermanagement.keyValueFileParameterOutputAdapter)

L

LevMarOptimizer (class in UGParameterEstimator.optimizers.levMarOptimizer) LinearParallelLineSearch (class in UGParameterEstimator.linesearches.lineSearches) LineSearch (class in UGParameterEstimator.linesearches.lineSearches) load() (UGParameterEstimator.dataanalysis.result.Result class method) LocalEvaluator (class in UGParameterEstimator.evaluators.localEvaluator)

locationCount (UGParameterEstimator.evaluationinput.freesurface_evaluation.FreeSurfaceEvaluation property) locations (UGParameterEstimator.evaluationinput.freesurface_evaluation.FreeSurfaceEvaluation attribute) log() (UGParameterEstimator.dataanalysis.result.Result method) LogarithmicParallelLineSearch (class in UGParameterEstimator.linesearches.lineSearches) LogParameter (class in UGParameterEstimator.parametermanagement.parameterManager)

M

max_iterations (UGParameterEstimator.linesearches.lineSearches.BacktrackingLineSearch attribute) (UGParameterEstimator.linesearches.lineSearches.LinearParallelLineSearch attribute) (UGParameterEstimator.linesearches.lineSearches.LogarithmicParallelLineSearch attribute) measurementToNumpyArrayConverter() (UGParameterEstimator.linesearches.lineSearches.LineSearch method) (UGParameterEstimator.optimizers.optimizer.Optimizer method) MMAOptimizer (class in UGParameterEstimator.optimizers.mmaOptimizer) module UGParameterEstimator UGParameterEstimator.dataanalysis UGParameterEstimator.dataanalysis.result UGParameterEstimator.evaluationinput UGParameterEstimator.evaluationinput.evaluation UGParameterEstimator.evaluationinput.freesurface_evaluation UGParameterEstimator.evaluators UGParameterEstimator.evaluators.clusterEvaluator UGParameterEstimator.evaluators.evaluator UGParameterEstimator.evaluators.localEvaluator UGParameterEstimator.linesearches UGParameterEstimator.linesearches.lineSearches UGParameterEstimator.optimizers UGParameterEstimator.optimizers.bayesOptimizer UGParameterEstimator.optimizers.gainedLevMarOptimizer UGParameterEstimator.optimizers.gaussNewtonOptimizer UGParameterEstimator.optimizers.gradDescOptimizer UGParameterEstimator.optimizers.levMarOptimizer UGParameterEstimator.optimizers.mmaOptimizer UGParameterEstimator.optimizers.optimizer UGParameterEstimator.optimizers.scipyOptimizers UGParameterEstimator.parametermanagement UGParameterEstimator.parametermanagement.keyValueFileParameterOutputAdapter UGParameterEstimator.parametermanagement.parameterManager UGParameterEstimator.parametermanagement.parameterOutputAdapter UGParameterEstimator.parametermanagement.UG4ParameterOutputAdapter

N

nanhandling (UGParameterEstimator.evaluationinput.freesurface_evaluation.FreeSurfaceEvaluation attribute)

nanreplacevalue (UGParameterEstimator.evaluationinput.freesurface_evaluation.FreeSurfaceEvaluation attribute) none (UGParameterEstimator.evaluationinput.freesurface_evaluation.FreeSurfaceEvaluation.NaNHandling attribute)

O

optimizationSpaceLowerBound (UGParameterEstimator.parametermanagement.parameterManager.DirectParameter property) (UGParameterEstimator.parametermanagement.parameterManager.LogParameter property) (UGParameterEstimator.parametermanagement.parameterManager.Parameter property) (UGParameterEstimator.parametermanagement.parameterManager.ScaledParameter property) optimizationSpaceUpperBound (UGParameterEstimator.parametermanagement.parameterManager.DirectParameter property) (UGParameterEstimator.parametermanagement.parameterManager.LogParameter property) (UGParameterEstimator.parametermanagement.parameterManager.Parameter property) (UGParameterEstimator.parametermanagement.parameterManager.ScaledParameter property)

Optimizer (class in UGParameterEstimator.optimizers.optimizer) Optimizer.Differencing (class in UGParameterEstimator.optimizers.optimizer)

P

parallel_evaluations (UGParameterEstimator.linesearches.lineSearches.LinearParallelLineSearch attribute) (UGParameterEstimator.linesearches.lineSearches.LogarithmicParallelLineSearch attribute) parallelism (UGParameterEstimator.evaluators.clusterEvaluator.ClusterEvaluator property) (UGParameterEstimator.evaluators.evaluator.Evaluator property) (UGParameterEstimator.evaluators.localEvaluator.LocalEvaluator property) Parameter (class in UGParameterEstimator.parametermanagement.parameterManager) ParameterManager (class in UGParameterEstimator.parametermanagement.parameterManager) ParameterManager.WrongMappingError ParameterOutputAdapter (class in UGParameterEstimator.parametermanagement.parameterOutputAdapter) parameters (UGParameterEstimator.evaluationinput.evaluation.Evaluation attribute)

parse() (UGParameterEstimator.evaluationinput.evaluation.ErroredEvaluation class method) (UGParameterEstimator.evaluationinput.evaluation.Evaluation class method) (UGParameterEstimator.evaluationinput.freesurface_evaluation.FreeSurfaceEvaluation class method) (UGParameterEstimator.evaluationinput.freesurface_evaluation.FreeSurfaceTimeDependentEvaluation class method) parseBinary() (UGParameterEstimator.evaluationinput.freesurface_evaluation.FreeSurfaceTimeDependentEvaluation class method) parseFromCSV() (UGParameterEstimator.evaluationinput.freesurface_evaluation.FreeSurfaceTimeDependentEvaluation class method) plotComparison() (UGParameterEstimator.dataanalysis.result.Result method) plotMultipleRuns() (UGParameterEstimator.dataanalysis.result.Result static method) printlog() (UGParameterEstimator.dataanalysis.result.Result method) pure_central (UGParameterEstimator.optimizers.optimizer.Optimizer.Differencing attribute) pure_forward (UGParameterEstimator.optimizers.optimizer.Optimizer.Differencing attribute)

R

read_char() (UGParameterEstimator.evaluationinput.freesurface_evaluation.BinaryReader method) read_double() (UGParameterEstimator.evaluationinput.freesurface_evaluation.BinaryReader method) read_int() (UGParameterEstimator.evaluationinput.freesurface_evaluation.BinaryReader method) readable (UGParameterEstimator.evaluationinput.freesurface_evaluation.BinaryReader property) replace (UGParameterEstimator.evaluationinput.freesurface_evaluation.FreeSurfaceEvaluation.NaNHandling attribute) reset() (UGParameterEstimator.evaluators.evaluator.Evaluator method) Result (class in UGParameterEstimator.dataanalysis.result) resultobj (UGParameterEstimator.evaluators.evaluator.Evaluator attribute) rho (UGParameterEstimator.linesearches.lineSearches.BacktrackingLineSearch attribute)

run() (UGParameterEstimator.optimizers.bayesOptimizer.BayesOptimizer method) (UGParameterEstimator.optimizers.gainedLevMarOptimizer.GainedLevMarOptimizer method) (UGParameterEstimator.optimizers.gaussNewtonOptimizer.GaussNewtonOptimizer method) (UGParameterEstimator.optimizers.gradDescOptimizer.GradientDescentOptimizer method) (UGParameterEstimator.optimizers.levMarOptimizer.LevMarOptimizer method) (UGParameterEstimator.optimizers.mmaOptimizer.MMAOptimizer method) (UGParameterEstimator.optimizers.optimizer.Optimizer method) (UGParameterEstimator.optimizers.scipyOptimizers.ScipyMinimizeOptimizer method) (UGParameterEstimator.optimizers.scipyOptimizers.ScipyNonlinearLeastSquaresOptimizer method) runtime (UGParameterEstimator.evaluationinput.evaluation.Evaluation attribute)

S

save() (UGParameterEstimator.dataanalysis.result.Result method) ScaledParameter (class in UGParameterEstimator.parametermanagement.parameterManager) ScipyMinimizeOptimizer (class in UGParameterEstimator.optimizers.scipyOptimizers)

ScipyNonlinearLeastSquaresOptimizer (class in UGParameterEstimator.optimizers.scipyOptimizers) serial_evaluation_count (UGParameterEstimator.evaluators.evaluator.Evaluator attribute) setResultObject() (UGParameterEstimator.evaluators.evaluator.Evaluator method) size (UGParameterEstimator.linesearches.lineSearches.LogarithmicParallelLineSearch attribute)

T

timeCount (UGParameterEstimator.evaluationinput.freesurface_evaluation.FreeSurfaceEvaluation property) times (UGParameterEstimator.evaluationinput.freesurface_evaluation.FreeSurfaceEvaluation attribute)

total_evaluation_count (UGParameterEstimator.evaluators.evaluator.Evaluator attribute) totalCount (UGParameterEstimator.evaluationinput.freesurface_evaluation.FreeSurfaceEvaluation property)

U

UG4ParameterOutputAdapter (class in UGParameterEstimator.parametermanagement.UG4ParameterOutputAdapter) UGParameterEstimator module UGParameterEstimator.dataanalysis module UGParameterEstimator.dataanalysis.result module UGParameterEstimator.evaluationinput module UGParameterEstimator.evaluationinput.evaluation module UGParameterEstimator.evaluationinput.freesurface_evaluation module UGParameterEstimator.evaluators module UGParameterEstimator.evaluators.clusterEvaluator module UGParameterEstimator.evaluators.evaluator module UGParameterEstimator.evaluators.localEvaluator module UGParameterEstimator.linesearches module UGParameterEstimator.linesearches.lineSearches module UGParameterEstimator.optimizers module

UGParameterEstimator.optimizers.bayesOptimizer module UGParameterEstimator.optimizers.gainedLevMarOptimizer module UGParameterEstimator.optimizers.gaussNewtonOptimizer module UGParameterEstimator.optimizers.gradDescOptimizer module UGParameterEstimator.optimizers.levMarOptimizer module UGParameterEstimator.optimizers.mmaOptimizer module UGParameterEstimator.optimizers.optimizer module UGParameterEstimator.optimizers.scipyOptimizers module UGParameterEstimator.parametermanagement module UGParameterEstimator.parametermanagement.keyValueFileParameterOutputAdapter module UGParameterEstimator.parametermanagement.parameterManager module UGParameterEstimator.parametermanagement.parameterOutputAdapter module UGParameterEstimator.parametermanagement.UG4ParameterOutputAdapter module

W

write3dPlot() (UGParameterEstimator.evaluationinput.freesurface_evaluation.FreeSurfaceTimeDependentEvaluation method) writeCSV() (UGParameterEstimator.evaluationinput.freesurface_evaluation.FreeSurfaceTimeDependentEvaluation method) writeCSVAtLocation() (UGParameterEstimator.evaluationinput.freesurface_evaluation.FreeSurfaceTimeDependentEvaluation method) writeCSVAtTimestep() (UGParameterEstimator.evaluationinput.freesurface_evaluation.FreeSurfaceTimeDependentEvaluation method) writeCSVAveragedOverLocation() (UGParameterEstimator.evaluationinput.freesurface_evaluation.FreeSurfaceTimeDependentEvaluation method) writeCSVAveragedOverTimesteps() (UGParameterEstimator.evaluationinput.freesurface_evaluation.FreeSurfaceTimeDependentEvaluation method) writeDifferentialPlot() (UGParameterEstimator.evaluationinput.freesurface_evaluation.FreeSurfaceTimeDependentEvaluation method) writeErrorTable() (UGParameterEstimator.dataanalysis.result.Result method) writeLatexTable() (UGParameterEstimator.dataanalysis.result.Result method)

writeMatrix() (UGParameterEstimator.dataanalysis.result.Result method) writeParameters() (UGParameterEstimator.parametermanagement.keyValueFileParameterOutputAdapter.KeyValueFileParameterOutputAdapter method) (UGParameterEstimator.parametermanagement.parameterOutputAdapter.ParameterOutputAdapter method) (UGParameterEstimator.parametermanagement.UG4ParameterOutputAdapter.UG4ParameterOutputAdapter method) writePlots() (UGParameterEstimator.evaluationinput.freesurface_evaluation.FreeSurfaceEquilibriumEvaluation static method) (UGParameterEstimator.evaluationinput.freesurface_evaluation.FreeSurfaceTimeDependentEvaluation method) writeSensitivityPlots() (UGParameterEstimator.dataanalysis.result.Result method) writeSimpleErrorTable() (UGParameterEstimator.dataanalysis.result.Result method) writeTable() (UGParameterEstimator.dataanalysis.result.Result method)